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The script file has a simple, space-delimited syntax.
Commands
"genome <version>"
- Specify a genome version (e.g., H_sapiens_Mar_2006). Any genome version or synonym that's accepted by IGB is accepted here.
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- Comments. Lines starting with '#' are ignored.
Example script
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#select genome genome A_thaliana_Jun_2009 #go to chromosome at region goto chr4:18,040,000 - 18,045,056 #load the file load http://igbquickload.org/quickload/A_thaliana_Jun_2009/nextgen_samples/sample.bam #set load mode to region in view loadmode REGION_IN_VIEW http://igbquickload.org/quickload/A_thaliana_Jun_2009/nextgen_samples/sample.bam #refresh to view data refresh |